Note: Copyrights may have been transferred to the appropriate publishers. Reprints are provided here for personal use only.
D. Ando, M. Colvin, M. Rexach, and A. Gopinathan, "Physical bioinformatics applied to intrinsically disordered Nucleoporin sequences reveals universal functional features," Biophysical Journal, 106(2), Feb. 2014, p. 484a (conference abstract).
T. G. Connolly, D. Ando, R. L. Wang, A. Gopinathan, S. D. Newsam, and M. E. Colvin, "Identifying local regions of order and disorder in FG-Nucleoporins and partially disordered proteins using molecular dynamics simulations," Biophysical Journal, 106(2), Feb. 2014, p. 608a (conference abstract).
R. L. Wang, T. G. Connolly, J. L. Phillips, A. V. Miguel, A. Gopinathan, S. D. Newsam, and M. E. Colvin, "Comparison of metrics of inter-structure distance when applied to molecular dynamics simulations of intrinsically disordered proteins," Biophysical Journal, 106(2), Feb. 2014, p. 610a (conference abstract).
D. Ando, R. Zandi, Y. W. Kim, M. Colvin, M. Rexach, and A. Gopinathan. "Nuclear pore complex protein sequences determine overall copolymer brush structure and function," Biophysical Journal, 106(9), 1997-2007, 2014.
D. Ando, M. E. Colvin, M. Rexach, and A. Gopinathan, "Physical motif clustering within intrinsically disordered nucleoporin sequences reveals universal functional features," Public Library of Science ONE, 8(9), 2013.
T. G. Connolly, R. L. Wang, A. V. Miguel, J. L. Phillips, E. Lau, and M. E. Colvin, "Measuring Disorder and Dynamical Properties of FG-Nucleoporins," Biophysical Journal, 104(2), Jan. 2013, p. 233a-234a (conference abstract).
D. A. Quint, A. Gopinathan, and G. M. Grason, "Conformational collapse of surface bound helical filaments," Soft Matter, 8(36), 9460, 2012.
J. Hsin, A. Gopinathan, and K. Huang, "Nucleotide-dependent conformations of FtsZ dimers and force generation observed through molecular dynamics simulations," Proceedings of the National Academy of Sciences, 109, 9432, 2012.
J. L. Phillips, A. Gopinathan, S. Newsam, and M. E. Colvin, "Dimensionality estimation of disordered protein dynamics," Biophysical Journal, vol. 102(3), Feb. 2012, p. 451a (conference abstract).
J. L. Phillips, E. Y. Lau, S. Newsam, and M. E. Colvin, "Probing the Conformation Landscape of the Unfolded State: Do Disordered and Unfolded Dynamics Differ?," Biophysical Journal, vol. 100, Feb. 2011, p. 185a-185a (conference abstract).
J. L. Phillips, M. E. Colvin, and S. Newsam, "Validating clustering of molecular dynamics simulations using polymer models," BMC Bioinformatics, 12:445, 23 pages, 2011.